NUPARM

Program for analysis of sequence dependent variations in nucleic acid (DNA & RNA) double helices

 

 Home
About Nuparm
References
Resources
Download
Contact Information
Lab Home

 

Please enter PDB-ID code of the DNA/RNA you want to analyze:

Alternatively, you can upload a PDB file:

Define Y-axis line as   C6 - C8  C1' - C1'

Reorient the molecule about a 'Linear Global Axis' fitted to:
Local HELIX ORIGINS (Type O)
Base-Pair CENTERS (Type C)
Any Backbone atom (Choose the atom type)
Not Required

Are P--P distances and Cylindrical Polar Coordinates required?
(Only meaningful for reoriented molecule) Yes No

Is the torsion angle calculation required?
Yes No

Are Single Strand parameters required?
Yes No

You are the visitor number:
Nuparm Home | About Nuparm | References | Resources | Download | Contact Information | Group Home

 
©2008 Molecular Biophysics Unit, Division of Biological Sciences, Indian Institute of Science, Bangalore-560012, INDIA
For problems or questions regarding this web contact
mb@mbu.iisc.ernet.in
Last updated: 03/04/08